BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032C01SP1|AL429532
(872 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1193 1667 0.0
>3x_Contig1193
Length = 4968
Score = 1667 bits (837), Expect = 0.0
Identities = 864/873 (98%), Gaps = 2/873 (0%)
Strand = Plus / Minus
Query: 1 taacctgcttttctccattgagcaatctgttcaccgtgataaatcaaaatataaaagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4400 taacctgcttttctccattgagcaatctgttcaccgtgataaatcaaaatataaaagaag 4341
Query: 61 gtatccaacaacaaaattgtgtttggtttcactgaaacagaatctaacaacactggttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4340 gtatccaacaacaaaattgtgtttggtttcactgaaacagaatctaacaacactggttga 4281
Query: 121 ggttcttcttccatggagaatgaggttagagtaggctgaatcataatcagtgagttagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4280 ggttcttcttccatggagaatgaggttagagtaggctgaatcataatcagtgagttagtg 4221
Query: 181 gtatcttctctagtgaaaatgtgtctgtbaaatgcagtttcatccggagagttattgara 240
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 4220 gtatcttctctagtgaaaatgtgtctgtaaaatgcagtttcatccggagagttattgaaa 4161
Query: 241 acagacaaaaactgagatcttctcaaatratatgtgaattgtggatacaatgaaaattga 300
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4160 acagacaaaaactgagatcttctcaaataatatgtgaattgtggatacaatgaaaattga 4101
Query: 301 ggagataatctgaatgatgatggatcattcttattgtagtcagcgtatttttgacacaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4100 ggagataatctgaatgatgatggatcattcttattgtagtcagcgtatttttgacacaat 4041
Query: 361 ttaatcaaagttctgtcaatccatctaatgacatcagcgccatcatcagattctgccttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4040 ttaatcaaagttctgtcaatccatctaatgacatcagcgccatcatcagattctgccttg 3981
Query: 421 tcaacagcmattcttgccattagaacggcagccgcctcctgatcaaaggaggatgcaatg 480
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 3980 tcaacagcaattcttgccattagaacggcagcagcctcctgatcaaaggaggatgcaatg 3921
Query: 481 gctggrtttccaaaggacaacatttggttagcaacagtggtgaccctgacacggtttgta 540
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3920 gctggatttccaaaggacaacatttggttagcaacagtggtgaccctgacacggtttgta 3861
Query: 541 ccgga-gaatgttcatacgatgtaatgaattgggtgtbagctaacttaggcctatctgtc 599
||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3860 ccggaggaatgttcatacgatgtaatgaattgggtgtaagctaacttaggcctatctgtc 3801
Query: 600 attacttcagcagatgcacccgggttgacaatttcaaagaacacagcgtaagtgtggcgt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3800 attacttcagcagatgcacccgggttgacaatttcaaagaacacagcgtaagtgtggcgt 3741
Query: 660 ggcgataaagatgacatcttccaagaagaagtaccaccaatacctatctcagaatcactg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3740 ggcgataaagatgacatcttccaagaagaagtaccaccaatacctatctcagaatcactg 3681
Query: 720 acattggaggcctcggtcttagtcttcacagcagaggcgtggccaattaaaccttgtaat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3680 acattggaggcctcggtcttagtcttcacagcagaggcgtggccaattaaaccttgtaat 3621
Query: 780 tttagatcgctacttgtcttaacagacaaggtacccttgaatgccatttgcaaataacct 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3620 tttagatcgctacttgtcttaacagacaaggtacccttgaatgccatttgcaaataacct 3561
Query: 840 tcttcatccttagaaaagaatcttagatatgac 872
|||||||||||||||||| ||||||||||||||
Sbjct: 3560 tcttcatccttagaaaag-atcttagatatgac 3529
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6527
Number of Sequences: 1807
Number of extensions: 6527
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 872
length of database: 10,358,551
effective HSP length: 16
effective length of query: 856
effective length of database: 10,329,639
effective search space: 8842170984
effective search space used: 8842170984
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)